BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C03LP1|AL428347
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1175 1754 0.0
>3x_Contig1175
Length = 4107
Score = 1754 bits (884), Expect = 0.0
Identities = 892/894 (99%), Gaps = 1/894 (0%)
Strand = Plus / Plus
Query: 1 gatcctattctcccgtccttactccgtctctcatattcacgcgataggatttagttgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2868 gatcctattctcccgtccttactccgtctctcatattcacgcgataggatttagttgatg 2927
Query: 61 ttacaatttgtggtaatgcacactacaaccacttgaaaacctctatgcggcgatcgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2928 ttacaatttgtggtaatgcacactacaaccacttgaaaacctctatgcggcgatcgcagc 2987
Query: 121 ggctcgttcgggcggtgctattagttctgaaaagactatttaggttctaaacgacatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2988 ggctcgttcgggcggtgctattagttctgaaaagactatttaggttctaaacgacatttt 3047
Query: 181 catttttttttcctgcataatgttgcatgaaaatgaacagatctgatagaaagcatagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3048 catttttttttcctgcataatgttgcatgaaaatgaacagatctgatagaaagcatagga 3107
Query: 241 ttacaagcccgaggaaatgcgtatcacagcacaacaaaaacatacacaaaacgacacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 ttacaagcccgaggaaatgcgtatcacagcacaacaaaaacatacacaaaacgacacttc 3167
Query: 301 ctcccgaggaaagctccttaaggtatgttttgtatttagatatgcggcttccttgtggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3168 ctcccgaggaaagctccttaaggtatgttttgtatttagatatgcggcttccttgtggtt 3227
Query: 361 tctactcctttatcgtttgtgggggagccacttacactgtcaggaatctatctatcgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 tctactcctttatcgtttgtgggggagccacttacactgtcaggaatctatctatcgctg 3287
Query: 421 gtcaaattctcagttccaagttttccacggaaaatgttcttttatctgcgta-stctgca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3288 gtcaaattctcagttccaagttttccacggaaaatgttcttttatctgcgtagctctgca 3347
Query: 480 ttagtttttgattatcagattttccatgattgtaacggaaatatcatacaaatccgttta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 ttagtttttgattatcagattttccatgattgtaacggaaatatcatacaaatccgttta 3407
Query: 540 acacggaaatgcgattagaggccatttagttggagatgtagagacgcatgtacgtagcct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 acacggaaatgcgattagaggccatttagttggagatgtagagacgcatgtacgtagcct 3467
Query: 600 agagccaagaactgtagtatgtgttctcatgcccgtggcaacattttctgagattttcca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468 agagccaagaactgtagtatgtgttctcatgcccgtggcaacattttctgagattttcca 3527
Query: 660 gcagttactttgaagtcttctcaattcatgtgcacttttgaactgtttttgttcactaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3528 gcagttactttgaagtcttctcaattcatgtgcacttttgaactgtttttgttcactaga 3587
Query: 720 atggtggtgaaaagtgcttcttagaccttttggcaaattcttcattagcaggtgtctatg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3588 atggtggtgaaaagtgcttcttagaccttttggcaaattcttcattagcaggtgtctatg 3647
Query: 780 gttagtttttgagtcagttaggtgttgcaaatgttgattcaattgggttaattgtgcttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3648 gttagtttttgagtcagttaggtgttgcaaatgttgattcaattgggttaattgtgcttt 3707
Query: 840 ttacttttcttttctttggtttgggtgtaagactgtagccgtgcattcagtggt 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3708 ttacttttcttttctttggtttgggtgtaagactgtagccgtgcattcagtggt 3761
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7109
Number of Sequences: 1807
Number of extensions: 7109
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)